Genomania
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  • Spring 2019 BIOL5591 Topics
  • Genomics
    • Sequencing Technologies
      • Sanger Sequencing
      • Pyrosequencing
      • SOLiD Sequencing
      • Illumina Sequencing
      • PacBio SMRT Sequencing
      • RNA Sequencing
      • qPCR and ddPCR
      • Single Cell RNA Sequencing
    • Phylogenetics
      • Basic Phylogenetic Trees
      • Phylogenetic trees by hand
    • Genomic Analysis
      • Phasing (Haplotype Estimation)
      • Imputation
    • Expression Analysis
      • Differential Expression Analysis
      • Gene Set Enrichment Analysis
      • MSigDb
    • Readings
      • WGS for Rare Variants (Natarajan 2017)
      • DropSeq (Mascko 2015)
      • Review of rare variants in disease (Bomba 2017)
    • Excel Tips and Tricks
      • Quantile Normalization
      • Making a QQ Plot
  • Statistics, Mathematics, and Visualization
    • Introductory Statistics Review
      • Fisher's Exact Test
    • Rare Variant Association
      • Burden Tests
      • SKAT
    • Gene expression analysis
      • Quantile Normalization Statistics
      • QQ Plots
    • Single Cell RNAseq Analysis
      • tSNE
    • Genome Assembly
      • De Bruijn Graphs
    • GWAS
      • Manhattan Plots
  • Bioinformatics Tools and Algorithms
    • Genome Alignment
      • Trinity
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